Sphingobacterium wenxiniae strain DSM 22789

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Sphingobacterium

Description

Sphingobacterium wenxiniae strain DSM 22789 is a Gram-negative, non-spore-forming rod that thrives under aerobic conditions, with an optimal growth temperature of 29.0°C. This bacterium belongs to the genus Sphingobacterium, which is characterized by its ability to degrade a variety of organic compounds, suggesting a potential role in environmental bioremediation processes. The Gram-negative cell wall structure typically imparts resilience to harsh environments, which may contribute to its ecological versatility. Sphingobacterium species are often found in diverse habitats, including soil and aquatic environments, where they can participate in nutrient cycling. The aerobic nature of S. wenxiniae indicates its reliance on oxygen for metabolic processes, which may influence its distribution in oxygen-rich microenvironments. The optimal growth temperature of 29.0°C aligns with mesophilic organisms and suggests that this strain may be well-suited for survival in temperate climates. Given these traits, Sphingobacterium wenxiniae strain DSM 22789 could play a significant role in the decomposition of organic materials, thus contributing to soil health and ecosystem functioning. Further research may elucidate specific metabolic pathways and interactions with other microbial communities in its natural habitats, enhancing our understanding of its ecological contributions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusSphingobacterium
SpeciesSphingobacterium wenxiniae
Strainstrain DSM 22789

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Image of Sphingobacterium wenxiniae strain DSM 22789
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobacterium wenxiniae strain DSM 22789


Gene Summary

Adenine Count

1136300 bp

Thymine Count

1133673 bp

Guanine Count

772492 bp

Cytosine Count

800309 bp

Genome Length

3844399 bp

Protein-coding Genes

3414 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rna . bacterial tsuNot AvailableNot Available+3 - 6318.01
hypothetical proteinSAMN05660206_1011Not Available-1 - 2449288.09
hypothetical proteinSAMN05660206_1012Not Available-331 - 119134074.3
superfamily ii dna and rna helicaseSAMN05660206_1013Not Available-1197 - 242345863.3
hypothetical proteinSAMN05660206_1014Not Available-2460 - 26637984.27
carboxypepd_reg-like domain-containing proteinSAMN05660206_1015Not Available-2674 - 350131678.8
dna repair protein radcSAMN05660206_1016Not Available-3485 - 417426171.6
peptidyl-prolyl cis-trans isomerase b (cyclophilin b)SAMN05660206_1017Not Available+4337 - 479516675.5
hypothetical proteinSAMN05660206_1018Not Available+4809 - 521315002.0
dna repair photolyaseSAMN05660206_1019Not Available-5378 - 644540408.8

Displaying genes 1 – 10 of 3468 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites