Acidaminococcus fermentans strain pGA-4

Coccusanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Negativicutes

Order

Acidaminococcales

Family

Acidaminococcaceae

Genus

Acidaminococcus

Description

Acidaminococcus fermentans strain pGA-4 is a Gram-negative coccus that exhibits strict anaerobic growth requirements. This microbe is part of a genus known for its ability to ferment amino acids, which plays an important role in various ecological niches, particularly in anaerobic environments such as the human gastrointestinal tract. The spherical morphology of Acidaminococcus fermentans indicates its adaptation to life in low-oxygen conditions, where it likely participates in the degradation of organic matter and the fermentation of nutrients. The anaerobic nature of this strain suggests its potential involvement in metabolic pathways that contribute to the overall microbial community dynamics within its habitat. By fermenting amino acids, Acidaminococcus fermentans strain pGA-4 not only generates energy for its own growth but may also influence the availability of nutrients for other anaerobic microorganisms, thereby shaping the microbial ecosystem. Furthermore, the activity of Acidaminococcus fermentans in amino acid fermentation may play a role in maintaining gut health by contributing to the production of short-chain fatty acids, which are known to have beneficial effects on host metabolism and immune function. This highlights the potential significance of Acidaminococcus fermentans strain pGA-4 in both microbial ecology and health-related aspects of anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassNegativicutes
OrderAcidaminococcales
FamilyAcidaminococcaceae
GenusAcidaminococcus
SpeciesAcidaminococcus fermentans
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidaminococcus fermentans strain pGA-4

Accession NumberFOWJ00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2107 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Prga-formyltransferaseSAMN02910455_01687Not Available-1792066 - 179300434103.5
Riia-riib membrane-associated proteinSAMN02910455_01688Not Available-1793001 - 179347717171.7
Dna-binding hth domain-containing proteinSAMN02910455_01689Not Available-1793841 - 17940237180.7
hypothetical proteinSAMN02910455_01690Not Available-1794245 - 179482621339.5
Hypothetical proteinSAMN02910455_01691Not Available-1794832 - 179542822242.0
hypothetical proteinSAMN02910455_01692Not Available-1795388 - 179574113164.0
hypothetical proteinSAMN02910455_01693Not Available-1795714 - 179599510511.9
Short tail fiber proteinSAMN02910455_01694Not Available-1796077 - 179674223599.8
hypothetical proteinSAMN02910455_01695Not Available-1796739 - 17968734947.03
hypothetical proteinSAMN02910455_01696Not Available-1796866 - 179730315968.4

Displaying genes 1 – 10 of 2200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

278 records
Metabolite IDMetabolite nameStructureCAS number
BASm0034638Adenosine-GDP-cobinamideC68H97CoN21O21P2Chemical structure of Adenosine-GDP-cobinamideNULL
Average1665.5066Da
Monoisotopic1664.597512489Da
BASm0034640Pentaglutamyl Folate (Thf)C39H45N11O18Chemical structure of Pentaglutamyl Folate (Thf)NULL
Average955.851Da
Monoisotopic955.297695132Da
BASm003465710-Formyltetrahydrofolate-[Glu](5)C40H45N11O19Not availableNULL
Average983.861Da
Monoisotopic983.292609752Da
BASm0034660ArsenobetaineC5H11AsO2Chemical structure of ArsenobetaineNULL
Average178.0612Da
Monoisotopic177.997501013Da
BASm0034668N6-Acetyl-LL-2,6-diaminoheptanedioateC9H14N2O5Chemical structure of N6-Acetyl-LL-2,6-diaminoheptanedioateNULL
Average230.221Da
Monoisotopic230.091368719Da
BASm0034676Reduced FMNC17H23N4O9PChemical structure of Reduced FMNNULL
Average458.3597Da
Monoisotopic458.120264866Da
BASm0034680Glycyl-L-tyrosineC11H14N2O4Chemical structure of Glycyl-L-tyrosineNULL
Average238.243Da
Monoisotopic238.095356939Da
BASm00346811,5-DiaminopentaneC5H14N2Chemical structure of 1,5-Diaminopentane462-94-2
Average102.1781Da
Monoisotopic102.115698458Da

Displaying 271–278 of 278 metabolites