Kingdom
Bacillati
Phylum
Bacillota
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Negativicutes |
| Order | Acidaminococcales |
| Family | Acidaminococcaceae |
| Genus | Acidaminococcus |
| Species | Acidaminococcus fermentans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Acidaminococcus fermentans strain pGA-4
Accession NumberFOWJ00000000.1
Gene Summary
Adenine Count
510915 bp
Thymine Count
525834 bp
Guanine Count
645158 bp
Cytosine Count
661070 bp
Genome Length
2344887 bp
Protein-coding Genes
2107 genes
Non-Coding Genes
93 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter protein lptc | SAMN02910455_00608 | Not Available | + | 647785 - 648333 | 19765.5 |
| osta-like protein | SAMN02910455_00609 | Not Available | + | 648333 - 649190 | 29919.3 |
| lipopolysaccharide export system atp-binding protein | SAMN02910455_00610 | Not Available | + | 649203 - 649922 | 26560.3 |
| lipopolysaccharide export system permease protein | SAMN02910455_00611 | Not Available | + | 649931 - 651022 | 40768.5 |
| hypothetical protein | SAMN02910455_00612 | Not Available | + | 651221 - 651628 | 15457.2 |
| dna-entry nuclease | SAMN02910455_00613 | Not Available | + | 651625 - 652365 | 27236.6 |
| protein of unknown function | SAMN02910455_00614 | Not Available | + | 652602 - 653825 | 43253.3 |
| rnase h-fold protein, predicted holliday junction resolvase | SAMN02910455_00615 | Not Available | + | 653818 - 654261 | 16374.8 |
| s-layer homology domain-containing protein | SAMN02910455_00616 | Not Available | + | 654516 - 655814 | 46995.7 |
| outer membrane protein (porin) | SAMN02910455_00617 | Not Available | + | 656199 - 657473 | 45869.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.