Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 2 - 85 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 11 - 123 | 18.01 |
| abc transporter | SAMN05443579_1011 | Not Available | - | 1 - 170 | 6179.61 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 263 - 3137 | 18.01 |
| nicotinamidase-related amidase | SAMN05443579_1012 | Not Available | + | 599 - 1219 | 22170.5 |
| transcriptional regulator, lysr family | SAMN05443579_1013 | Not Available | - | 1204 - 2097 | 32349.8 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 3721 - 5259 | 18.01 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05443579_1014 | Not Available | - | 2177 - 3742 | 55808.9 |
| membrane fusion protein, multidrug efflux system | SAMN05443579_1015 | Not Available | - | 3784 - 5124 | 46565.3 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05443579_1016 | Not Available | - | 5154 - 6656 | 51987.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.