Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444682_1017 | Not Available | + | 8816 - 8950 | 5329.47 |
| hypothetical protein | SAMN05444682_1018 | Not Available | + | 8910 - 9707 | 28718.7 |
| helix-hairpin-helix motif-containing protein | SAMN05444682_1019 | Not Available | + | 9697 - 11742 | 78369.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_10110 | Not Available | + | 11969 - 15289 | 122164.0 |
| susd family protein | SAMN05444682_10111 | Not Available | + | 15302 - 16795 | 56794.7 |
| arylsulfatase a | SAMN05444682_10112 | Not Available | + | 16834 - 18405 | 59264.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444682_10113 | Not Available | + | 18421 - 18993 | 22290.3 |
| fecr family protein | SAMN05444682_10114 | Not Available | + | 18993 - 20186 | 44801.0 |
| arylsulfatase a | SAMN05444682_10115 | Not Available | + | 20192 - 21964 | 67655.4 |
| protein of unknown function | SAMN05444682_10116 | Not Available | + | 21996 - 22916 | 34599.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.