Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter indicus |
| Strain | strain RK1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1604354 bp
Thymine Count
1596710 bp
Guanine Count
1452045 bp
Cytosine Count
1501904 bp
Genome Length
6155226 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 1 - 87 | 18.01 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 18 - 129 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 200 - 3075 | 18.01 |
| transcriptional regulator, laci family | SAMN05444682_1011 | Not Available | - | 215 - 1240 | 38863.9 |
| sugar phosphate isomerase/epimerase | SAMN05444682_1012 | Not Available | + | 1368 - 2225 | 31796.2 |
| oxidoreductase family, nad-binding rossmann fold | SAMN05444682_1013 | Not Available | + | 2279 - 3703 | 53197.8 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 3560 - 5086 | 18.01 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444682_1014 | Not Available | + | 3974 - 7048 | 113767.0 |
| hypothetical protein | SAMN05444682_1015 | Not Available | + | 7048 - 7161 | 4419.1 |
| starch-binding associating with outer membrane | SAMN05444682_1016 | Not Available | + | 7100 - 8797 | 64320.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.