Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | strain ATCC 51969 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362221 bp
Thymine Count
1361672 bp
Guanine Count
914548 bp
Cytosine Count
930759 bp
Genome Length
4570120 bp
Protein-coding Genes
4074 genes
Non-Coding Genes
88 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Phage head morphogenesis protein | SAMN03003324_00847 | Not Available | - | 939814 - 940875 | 40872.0 |
| Phage portal protein | SAMN03003324_00848 | Not Available | - | 941005 - 942393 | 52396.1 |
| hypothetical protein | SAMN03003324_00849 | Not Available | - | 942390 - 942677 | 11068.7 |
| hypothetical protein | SAMN03003324_00850 | Not Available | - | 942717 - 943118 | 15517.5 |
| Putative phage terminase large subunit | SAMN03003324_00851 | Not Available | - | 943126 - 944589 | 56105.1 |
| Hth domain containing protein | SAMN03003324_00852 | Not Available | - | 944586 - 944978 | 14927.0 |
| Hypothetical protein | SAMN03003324_00853 | Not Available | - | 945036 - 945800 | 29648.1 |
| hypothetical protein | SAMN03003324_00854 | Not Available | - | 945848 - 946045 | 7164.55 |
| hypothetical protein | SAMN03003324_00855 | Not Available | - | 946029 - 946502 | 18572.8 |
| Umud | SAMN03003324_00856 | Not Available | + | 946668 - 947108 | 16457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.