Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudooceanicola nitratireducens strain DSM 29619
Accession NumberFOLX00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05421762_3871 | Not Available | - | 4010698 - 4011396 | 26623.4 |
| type ii secretory pathway, component exea (predicted atpase) | SAMN05421762_3872 | Not Available | + | 4012086 - 4012943 | 32194.5 |
| polysaccharide chain length determinant protein, pep-cterm locus subfamily | SAMN05421762_3873 | Not Available | + | 4012943 - 4014505 | 57626.0 |
| capsular exopolysaccharide family | SAMN05421762_3874 | Not Available | + | 4014537 - 4015376 | 30537.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05421762_3875 | Not Available | + | 4015426 - 4015995 | 20989.6 |
| dtdp-glucose 4,6-dehydratase | SAMN05421762_3876 | Not Available | + | 4015992 - 4017044 | 38865.8 |
| sulfotransferase family protein | SAMN05421762_3877 | Not Available | + | 4017044 - 4017742 | 27255.7 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421762_3878 | Not Available | + | 4017739 - 4018593 | 30023.3 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421762_3879 | Not Available | + | 4018590 - 4019465 | 31622.2 |
| hypothetical protein | SAMN05421762_3880 | Not Available | + | 4019550 - 4019813 | 8846.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.