Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudooceanicola nitratireducens strain DSM 29619
Accession NumberFOLX00000000.1
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrous oxidase accessory protein | SAMN05421762_0918 | Not Available | + | 936430 - 937683 | 44936.0 |
| cu-processing system atp-binding protein | SAMN05421762_0919 | Not Available | + | 937680 - 938588 | 31950.3 |
| cu-processing system permease protein | SAMN05421762_0920 | Not Available | + | 938585 - 939412 | 28600.0 |
| copper chaperone nosl | SAMN05421762_0921 | Not Available | + | 939409 - 939942 | 19135.8 |
| thiamine biosynthesis lipoprotein | SAMN05421762_0922 | Not Available | + | 939939 - 940856 | 32284.6 |
| dissimilatory nitrite reductase (no-forming), copper type apoprotein | SAMN05421762_0923 | Not Available | + | 940940 - 942088 | 41796.9 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN05421762_0924 | Not Available | + | 942169 - 942999 | 29144.4 |
| cbs domain-containing membrane protein | SAMN05421762_0925 | Not Available | + | 943078 - 944223 | 40475.6 |
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN05421762_0926 | Not Available | - | 944387 - 945586 | 42519.0 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05421762_0927 | Not Available | - | 945871 - 947226 | 49924.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.