Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudooceanicola nitratireducens strain DSM 29619
Accession NumberFOLX00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN05421762_3747 | Not Available | - | 3876261 - 3876989 | 27307.2 |
| spermidine/putrescine transport system atp-binding protein | SAMN05421762_3748 | Not Available | - | 3876986 - 3878008 | 37130.7 |
| spermidine/putrescine transport system permease protein | SAMN05421762_3749 | Not Available | - | 3878005 - 3878775 | 27718.1 |
| spermidine/putrescine transport system permease protein | SAMN05421762_3750 | Not Available | - | 3878775 - 3879629 | 31561.7 |
| spermidine/putrescine transport system substrate-binding protein | SAMN05421762_3751 | Not Available | - | 3879666 - 3880712 | 37502.1 |
| transcriptional regulator, tetr family | SAMN05421762_3752 | Not Available | + | 3880825 - 3881424 | 22110.5 |
| transcriptional regulator, xre family with cupin sensor | SAMN05421762_3753 | Not Available | - | 3881447 - 3882019 | 20771.8 |
| 4-aminobutyrate aminotransferase | SAMN05421762_3754 | Not Available | + | 3882165 - 3883442 | 45131.5 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05421762_3755 | Not Available | + | 3883444 - 3884913 | 51772.1 |
| s-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase | SAMN05421762_3757 | Not Available | - | 3885625 - 3886752 | 40022.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.