Pseudooceanicola nitratireducens strain DSM 29619

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Pseudooceanicola

Description

Pseudooceanicola nitratireducens strain DSM 29619 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 29.0°C and exhibits aerobic metabolic characteristics. This strain is part of the genus Pseudooceanicola, which is recognized for its potential involvement in biogeochemical cycles, particularly in nitrate reduction processes. The Gram-negative nature of this microbe suggests a complex cell wall structure, typically characterized by a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which may influence its interactions within aquatic environments. The aerobic requirement indicates that P. nitratireducens relies on oxygen for its energy production, which may position it strategically in environments that are oxygenated, possibly influencing its ecological niche in marine or freshwater habitats. The optimal growth temperature of 29.0°C suggests a preference for warm environments, which could correlate with specific ecological settings such as thermally stable aquatic systems. Considering these traits, Pseudooceanicola nitratireducens strain DSM 29619 may play a significant role in nitrogen cycling, particularly in environments where nitrate levels are elevated, thereby contributing to the overall health and balance of microbial communities in its native habitat. The bacterium's ability to thrive in aerobic conditions while participating in nitrate reduction could provide insight into its potential applications in bioremediation efforts aimed at mitigating nitrogen pollution in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusPseudooceanicola
SpeciesPseudooceanicola nitratireducens
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudooceanicola nitratireducens strain DSM 29619

Accession NumberFOLX00000000.1

Gene Summary

Adenine Count

723621 bp

Thymine Count

732084 bp

Guanine Count

1336110 bp

Cytosine Count

1276459 bp

Genome Length

4068972 bp

Protein-coding Genes

3819 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
catechol 2,3-dioxygenaseSAMN05421762_3388Not Available+3509212 - 351019237224.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05421762_3389Not Available+3510201 - 351108231955.0
2-oxohept-3-enedioate hydrataseSAMN05421762_3390Not Available+3511079 - 351187628529.4
2,4-dihydroxyhept-2-enedioate aldolaseSAMN05421762_3391Not Available+3511886 - 351264426255.5
acetolactate synthase-1/2/3 large subunitSAMN05421762_3392Not Available+3512748 - 351437358478.9
alcohol dehydrogenase, class ivSAMN05421762_3393Not Available+3514636 - 351579039616.8
acyl-coa thioester hydrolaseSAMN05421762_3394Not Available+3515790 - 351622716300.3
monosaccharide abc transporter substrate-binding protein, cut2 familySAMN05421762_3395Not Available+3516567 - 351758635815.0
monosaccharide abc transporter atp-binding protein, cut2 familySAMN05421762_3396Not Available+3517680 - 351917353631.5
monosaccharide abc transporter membrane protein, cut2 familySAMN05421762_3397Not Available+3519175 - 352013132595.4

Displaying genes 3361 – 3370 of 3875 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites