Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola nitratireducens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudooceanicola nitratireducens strain DSM 29619
Accession NumberFOLX00000000.1
Gene Summary
Adenine Count
723621 bp
Thymine Count
732084 bp
Guanine Count
1336110 bp
Cytosine Count
1276459 bp
Genome Length
4068972 bp
Protein-coding Genes
3819 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-1 operon protein hyae | SAMN05421762_2747 | Not Available | + | 2840685 - 2841068 | 13893.5 |
| hydrogenase-1 operon protein hyaf | SAMN05421762_2748 | Not Available | + | 2841143 - 2841958 | 29242.4 |
| [nife] hydrogenase assembly chaperone, hybe family | SAMN05421762_2749 | Not Available | + | 2841955 - 2842788 | 30436.8 |
| hypothetical protein | SAMN05421762_2750 | Not Available | + | 2842785 - 2843765 | 33304.4 |
| hydrogenase-3 nickel incorporation protein hypa | SAMN05421762_2751 | Not Available | + | 2843758 - 2844099 | 12426.2 |
| hydrogenase nickel incorporation protein hypb | SAMN05421762_2752 | Not Available | + | 2844099 - 2845007 | 32556.0 |
| two-component system, ntrc family, response regulator hupr/hoxa | SAMN05421762_2753 | Not Available | + | 2845007 - 2846479 | 54183.1 |
| hydrogenase expression/formation protein hypc | SAMN05421762_2754 | Not Available | + | 2846483 - 2846809 | 11336.6 |
| hydrogenase maturation protein hypd | SAMN05421762_2755 | Not Available | + | 2846806 - 2847954 | 41387.9 |
| hydrogenase maturation protein, carbamoyl dehydratase hype | SAMN05421762_2756 | Not Available | + | 2847981 - 2849027 | 35886.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.