Chryseobacterium humi strain DSM 21580

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Halpernia

Description

Chryseobacterium humi strain DSM 21580 is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolic characteristics and thrives optimally at a temperature of 29.0°C. This strain is part of the Chryseobacterium genus, which is known for its diverse environmental distribution and potential roles in various ecological niches. The Gram-negative nature of C. humi indicates a complex cell wall structure, which may influence its interactions with the surrounding environment and other microorganisms. The optimal growth temperature of 29.0°C suggests that C. humi is adapted to mesophilic conditions, potentially allowing it to flourish in temperate habitats. Its aerobic requirement indicates that this organism relies on oxygen for energy production, positioning it within environments where oxygen is readily available, such as soil or water. Further examination of C. humi’s metabolic capabilities could reveal its role in nutrient cycling or its interactions within microbial communities. Given its adaptation to aerobic conditions and optimal growth temperature, this strain may contribute to the decomposition of organic matter in its natural habitats, facilitating nutrient availability for other organisms. As such, C. humi could be an important player in the maintenance of soil health and ecosystem functioning, highlighting its ecological significance within microbial consortia.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusHalpernia
SpeciesHalpernia humi
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chryseobacterium humi strain DSM 21580


Gene Summary

Adenine Count

1047777 bp

Thymine Count

1041008 bp

Guanine Count

517458 bp

Cytosine Count

514943 bp

Genome Length

3121186 bp

Protein-coding Genes

2872 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
23s ribosomal rna . bacterial lsuNot AvailableNot Available+300 - 307618.01
hypothetical proteinSAMN05421847_0001Not Available-200 - 119836788.6
uridylate kinaseSAMN05421847_0002Not Available+1695 - 240225543.1
ribosome recycling factorSAMN05421847_0003Not Available+2442 - 302621664.0
thiol peroxidase (atypical 2-cys peroxiredoxin)SAMN05421847_0004Not Available+3183 - 375820792.4
16s ribosomal rna . bacterial ssuNot AvailableNot Available+3891 - 541018.01
hypothetical proteinSAMN05421847_0005Not Available-3834 - 465231317.8
hypothetical proteinSAMN05421847_0006Not Available+4748 - 49186404.75
hypothetical proteinSAMN05421847_0007Not Available-4842 - 50156705.28
pin domain-containing proteinSAMN05421847_0008Not Available-5008 - 547517768.4

Displaying genes 1 – 10 of 2910 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites