Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Halpernia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Weeksellaceae |
| Genus | Halpernia |
| Species | Halpernia humi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1047777 bp
Thymine Count
1041008 bp
Guanine Count
517458 bp
Cytosine Count
514943 bp
Genome Length
3121186 bp
Protein-coding Genes
2872 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 300 - 3076 | 18.01 |
| hypothetical protein | SAMN05421847_0001 | Not Available | - | 200 - 1198 | 36788.6 |
| uridylate kinase | SAMN05421847_0002 | Not Available | + | 1695 - 2402 | 25543.1 |
| ribosome recycling factor | SAMN05421847_0003 | Not Available | + | 2442 - 3026 | 21664.0 |
| thiol peroxidase (atypical 2-cys peroxiredoxin) | SAMN05421847_0004 | Not Available | + | 3183 - 3758 | 20792.4 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 3891 - 5410 | 18.01 |
| hypothetical protein | SAMN05421847_0005 | Not Available | - | 3834 - 4652 | 31317.8 |
| hypothetical protein | SAMN05421847_0006 | Not Available | + | 4748 - 4918 | 6404.75 |
| hypothetical protein | SAMN05421847_0007 | Not Available | - | 4842 - 5015 | 6705.28 |
| pin domain-containing protein | SAMN05421847_0008 | Not Available | - | 5008 - 5475 | 17768.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
