Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Structural protein | SAMN05444145_105226 | Not Available | - | 2219876 - 2220292 | 15127.2 |
| Hypothetical protein | SAMN05444145_105227 | Not Available | - | 2220297 - 2222765 | 92385.0 |
| protein of unknown function | SAMN05444145_105228 | Not Available | - | 2222801 - 2223184 | 14673.5 |
| Hypothetical protein | SAMN05444145_105229 | Not Available | - | 2223230 - 2224744 | 58132.5 |
| putative atpase subunit of terminase (gpp-like) | SAMN05444145_105230 | Not Available | - | 2224748 - 2225257 | 19363.3 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | + | 2225392 - 2225467 | Not Available |
| Head maturation protease | SAMN05444145_105232 | Not Available | + | 2225598 - 2226722 | 40422.5 |
| Capsid protein | SAMN05444145_105233 | Not Available | + | 2226756 - 2227658 | 33128.2 |
| Virion protein | SAMN05444145_105234 | Not Available | + | 2227957 - 2228364 | 15748.9 |
| hypothetical protein | SAMN05444145_105235 | Not Available | + | 2228361 - 2228876 | 18514.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.