Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Prevotella ruminicola strain D31d
Accession NumberFNRF00000000.1
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SAMN05216462_0440 | Not Available | - | 577354 - 579039 | 64381.9 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05216462_0442 | Not Available | - | 579614 - 581689 | 78102.8 |
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN05216462_0443 | Not Available | - | 581772 - 583163 | 50755.2 |
| sialate o-acetylesterase | SAMN05216462_0444 | Not Available | - | 583172 - 585124 | 73391.4 |
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN05216462_0445 | Not Available | + | 585289 - 586737 | 53534.7 |
| glycosyl hydrolases family 43 | SAMN05216462_0446 | Not Available | + | 586755 - 587756 | 37866.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_0447 | Not Available | + | 587749 - 588243 | 19293.0 |
| predicted zn-dependent peptidase | SAMN05216462_0448 | Not Available | - | 588236 - 589486 | 46673.6 |
| 7-cyano-7-deazaguanine synthase | SAMN05216462_0449 | Not Available | - | 589488 - 590183 | 25564.4 |
| protein of unknown function | SAMN05216462_0450 | Not Available | - | 590301 - 591368 | 40629.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.