Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Prevotella ruminicola strain D31d
Accession NumberFNRF00000000.1
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| wyosine | SAMN05216462_1686 | Not Available | - | 2023428 - 2024204 | 29021.9 |
| cell division transport system permease protein | SAMN05216462_1687 | Not Available | + | 2024258 - 2025172 | 34216.3 |
| protein of unknown function | SAMN05216462_1688 | Not Available | + | 2025207 - 2025431 | 8216.34 |
| undecaprenyl-diphosphatase | SAMN05216462_1689 | Not Available | + | 2025472 - 2026275 | 29082.7 |
| trna pseudouridine55 synthase | SAMN05216462_1690 | Not Available | + | 2026272 - 2026973 | 26090.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05216462_1691 | Not Available | + | 2027007 - 2028071 | 40710.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN05216462_1692 | Not Available | + | 2028082 - 2028504 | 15870.2 |
| long-chain fatty acid transport protein | SAMN05216462_1693 | Not Available | - | 2028514 - 2029902 | 51160.4 |
| cytidylate kinase | SAMN05216462_1694 | Not Available | - | 2029997 - 2030689 | 25952.9 |
| hypothetical protein | SAMN05216462_1695 | Not Available | - | 2030686 - 2031636 | 34266.7 |
Pathways
401 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Lysine Biosynthesis
Lysine Biosynthesis
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Glycine Biosynthesis
Glycine Biosynthesis