Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Prevotella ruminicola strain D31d
Accession NumberFNRF00000000.1
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216462_1645 | Not Available | + | 1972872 - 1972973 | 3447.47 |
| hypothetical protein | SAMN05216462_1646 | Not Available | - | 1973025 - 1974236 | 45920.3 |
| hypothetical protein | SAMN05216462_1647 | Not Available | + | 1974594 - 1975568 | 35902.4 |
| hypothetical protein | SAMN05216462_1648 | Not Available | + | 1975582 - 1978584 | 114124.0 |
| membrane proteinase prsw, cleaves anti-sigma factor rsiw, m82 family | SAMN05216462_1649 | Not Available | + | 1978585 - 1979613 | 38243.7 |
| hypothetical protein | SAMN05216462_1650 | Not Available | - | 1979606 - 1980472 | 33059.6 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05216462_1651 | Not Available | - | 1980475 - 1981221 | 27890.8 |
| thymidine kinase | SAMN05216462_1652 | Not Available | + | 1981269 - 1981871 | 22394.8 |
| predicted purr-regulated permease perm | SAMN05216462_1653 | Not Available | + | 1981846 - 1982946 | 40585.3 |
| alpha-d-xyloside xylohydrolase | SAMN05216462_1655 | Not Available | - | 1983153 - 1985543 | 90659.5 |
Pathways
401 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Lysine Biosynthesis
Lysine Biosynthesis
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Glycine Biosynthesis
Glycine Biosynthesis