Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Prevotella ruminicola strain D31d
Accession NumberFNRF00000000.1
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna helicase-2 / atp-dependent dna helicase pcra | SAMN05216462_1372 | Not Available | - | 1679204 - 1681777 | 98028.0 |
| dna-binding protein, histone-like, putative | SAMN05216462_1373 | Not Available | + | 1682149 - 1682721 | 19854.3 |
| hypothetical protein | SAMN05216462_1374 | Not Available | + | 1682815 - 1682916 | 3447.37 |
| dna polymerase-3 subunit epsilon | SAMN05216462_1376 | Not Available | - | 1683497 - 1683988 | 18663.9 |
| hypothetical protein | SAMN05216462_1377 | Not Available | - | 1684040 - 1684708 | 25570.3 |
| hypothetical protein | SAMN05216462_1381 | Not Available | - | 1685179 - 1685547 | 13605.4 |
| dipeptidase d | SAMN05216462_1382 | Not Available | - | 1685544 - 1687004 | 53893.9 |
| hypothetical protein | SAMN05216462_1383 | Not Available | + | 1687072 - 1687278 | 7772.7 |
| periplasmic chaperone for outer membrane proteins skp | SAMN05216462_1384 | Not Available | + | 1687365 - 1687985 | 23134.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05216462_1385 | Not Available | - | 1688050 - 1689267 | 45906.7 |
Pathways
401 pathways
2,3-Dihydroxybenzoate Biosynthesis
2,3-Dihydroxybenzoate Biosynthesis
Biosynthesis of Siderophore Group Nonribosomal Peptides
Biosynthesis of Siderophore Group Nonribosomal Peptides
Lipoic Acid Metabolism
Lipoic Acid Metabolism
Lysine Biosynthesis
Lysine Biosynthesis
Palmitate Biosynthesis
Palmitate Biosynthesis
Fatty Acid Elongation (Saturated)
Fatty Acid Elongation (Saturated)
tRNA Charging
tRNA Charging
Glycine Biosynthesis
Glycine Biosynthesis