Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hartonius |
| Strain | strain DSM 19033 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1480734 bp
Thymine Count
1474946 bp
Guanine Count
1102971 bp
Cytosine Count
1129882 bp
Genome Length
5188723 bp
Protein-coding Genes
4628 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative nuclease | SAMN05443550_101582 | Not Available | + | 620805 - 621767 | 35354.8 |
| Prga-formyltransferase | SAMN05443550_101583 | Not Available | + | 622143 - 623108 | 36022.4 |
| Minor tail protein | SAMN05443550_101584 | Not Available | + | 623112 - 623639 | 18208.7 |
| Tail protein | SAMN05443550_101585 | Not Available | + | 623647 - 624141 | 16995.2 |
| Minor tail protein | SAMN05443550_101586 | Not Available | + | 624169 - 624696 | 17920.2 |
| Minor tail protein | SAMN05443550_101587 | Not Available | + | 624867 - 632486 | 255157.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN05443550_101588 | Not Available | + | 632547 - 633428 | 32236.3 |
| hypothetical protein | SAMN05443550_101589 | Not Available | + | 633666 - 633839 | 6743.42 |
| Glycerophosphoryldiester phosphodiesterase | SAMN05443550_101590 | Not Available | + | 634068 - 634970 | 33699.7 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 1 - 72 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
