Thiothrix caldifontis strain DSM 21228

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Thiothrix caldifontis strain DSM 21228 is a Gram-negative, rod-shaped bacterium that thrives under aerobic conditions, with an optimal growth temperature of 25.0°C. This strain exhibits the typical morphological characteristics associated with the genus Thiothrix, which is known for its filamentous growth in various aquatic environments. As a member of the Thiothrix genus, this strain is likely involved in sulfur oxidation processes, which are fundamental to biogeochemical cycles in its natural habitats. Its aerobic nature suggests a reliance on oxygen for metabolic processes, potentially positioning it in environments where oxygen is readily available, such as surface waters or oxygenated sediments. The optimal growth temperature of 25.0°C indicates that Thiothrix caldifontis strain DSM 21228 may be well-suited to temperate environments or regions with moderate thermal conditions. Understanding the physiological traits of this strain contributes to a broader comprehension of microbial diversity in sulfur-rich ecosystems. The ecological role of this bacterium in sulfur cycling could provide insights into nutrient dynamics and the maintenance of ecosystem health in aquatic systems, highlighting the importance of microbial communities in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix caldifontis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix caldifontis strain DSM 21228

Accession NumberFNQP00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3767 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
nitrogen fixation protein nifxSAMN05660964_03649Not Available+3755704 - 375648627830.5
dna (cytosine-5)-methyltransferase 1SAMN05660964_03650Not Available-3756512 - 375769644652.3
hypothetical proteinSAMN05660964_03651Not Available-3757693 - 375825020975.8
dna-binding transcriptional regulator, xre-family hth domainSAMN05660964_03652Not Available-3758247 - 37584778747.57
pyruvate formate lyase activating enzymeSAMN05660964_03653Not Available-3758834 - 375991340243.8
hypothetical proteinSAMN05660964_03654Not Available+3759976 - 376078528924.6
uncharacterized protein, ph0010 family/ammememoradisam system protein aSAMN05660964_03655Not Available+3760772 - 376133220632.8
response regulator receiver domain-containing proteinSAMN05660964_03657Not Available-3761805 - 376263830682.0
chemotaxis protein histidine kinase cheaSAMN05660964_03658Not Available-3762655 - 3765549106806.0
twitching motility protein piljSAMN05660964_03659Not Available-3765553 - 376738266835.3

Displaying genes 3641 – 3650 of 3813 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites