Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix caldifontis strain DSM 21228
Accession NumberFNQP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ntrc family, c4-dicarboxylate transport sensor histidine kinase dctb | SAMN05660964_00309 | Not Available | - | 309882 - 311591 | 64256.8 |
| rare lipoprotein a | SAMN05660964_00310 | Not Available | - | 311645 - 312376 | 26328.6 |
| hypothetical protein | SAMN05660964_00311 | Not Available | + | 312601 - 312834 | 8796.36 |
| d-alanyl-d-alanine carboxypeptidase, serine-type, pbp4 family | SAMN05660964_00312 | Not Available | + | 313042 - 314574 | 54900.3 |
| hypothetical protein | SAMN05660964_00313 | Not Available | - | 314630 - 314809 | 6698.71 |
| ribosomal protein s12 methylthiotransferase | SAMN05660964_00314 | Not Available | - | 315038 - 316348 | 47934.2 |
| phosphoribulokinase | SAMN05660964_00315 | Not Available | + | 316838 - 317755 | 34348.7 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN05660964_00316 | Not Available | - | 317795 - 318208 | 15647.0 |
| cdp-4-dehydro-6-deoxyglucose reductase | SAMN05660964_00317 | Not Available | - | 318205 - 319257 | 38655.5 |
| formate-dependent phosphoribosylglycinamide formyltransferase | SAMN05660964_00318 | Not Available | + | 319352 - 320548 | 42595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.