Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix caldifontis strain DSM 21228
Accession NumberFNQP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative abc transport system permease protein | SAMN05660964_00299 | Not Available | - | 298569 - 301124 | 91563.5 |
| hypothetical protein | SAMN05660964_00300 | Not Available | - | 301093 - 302280 | 44904.2 |
| putative abc transport system atp-binding protein | SAMN05660964_00301 | Not Available | - | 302309 - 302995 | 24508.8 |
| pega domain-containing protein | SAMN05660964_00302 | Not Available | + | 303136 - 304266 | 39858.5 |
| toxin yoeb | SAMN05660964_00303 | Not Available | - | 304276 - 304494 | 8668.47 |
| antitoxin yefm | SAMN05660964_00304 | Not Available | - | 304524 - 304781 | 9656.55 |
| hypothetical protein | SAMN05660964_00305 | Not Available | + | 304969 - 305598 | 23750.5 |
| zn-dependent peptidase imma, m78 family | SAMN05660964_00306 | Not Available | + | 305636 - 306706 | 40408.6 |
| asparagine synthase (glutamine-hydrolysing) | SAMN05660964_00307 | Not Available | + | 306752 - 308527 | 66777.2 |
| two-component system, ntrc family, c4-dicarboxylate transport response regulator dctd | SAMN05660964_00308 | Not Available | - | 308530 - 309885 | 50367.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.