Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix caldifontis strain DSM 21228
Accession NumberFNQP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s11 | SAMN05660964_00219 | Not Available | + | 215152 - 215556 | 14256.1 |
| small subunit ribosomal protein s4 | SAMN05660964_00220 | Not Available | + | 215568 - 216188 | 23219.9 |
| dna-directed rna polymerase subunit alpha | SAMN05660964_00221 | Not Available | + | 216215 - 217219 | 36994.3 |
| large subunit ribosomal protein l17 | SAMN05660964_00222 | Not Available | + | 217245 - 217628 | 14311.3 |
| hypothetical protein | SAMN05660964_00223 | Not Available | + | 217701 - 218084 | 14538.9 |
| biotin synthase | SAMN05660964_00224 | Not Available | + | 218095 - 219066 | 35895.9 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05660964_00225 | Not Available | + | 219080 - 220951 | 68890.2 |
| 16s rrna m(7)g-527 methyltransferase | SAMN05660964_00226 | Not Available | + | 220955 - 221533 | 21504.9 |
| chromosome partitioning protein | SAMN05660964_00227 | Not Available | + | 221548 - 222345 | 28826.9 |
| chromosome partitioning protein, parb family | SAMN05660964_00228 | Not Available | + | 222339 - 223193 | 31301.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.