Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix caldifontis strain DSM 21228
Accession NumberFNQP00000000.1
Gene Summary
Adenine Count
975519 bp
Thymine Count
966984 bp
Guanine Count
988017 bp
Cytosine Count
1001078 bp
Genome Length
3936903 bp
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660964_01053 | Not Available | + | 1056568 - 1058118 | 59353.3 |
| trypsin-like peptidase domain-containing protein | SAMN05660964_01054 | Not Available | + | 1058270 - 1059319 | 36212.7 |
| atp-dependent helicase hrpa | SAMN05660964_01055 | Not Available | + | 1059415 - 1063122 | 142569.0 |
| capsular exopolysaccharide family | SAMN05660964_01056 | Not Available | - | 1063112 - 1065367 | 82906.7 |
| mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN05660964_01057 | Not Available | - | 1065472 - 1066908 | 52340.4 |
| gdp-l-fucose synthase | SAMN05660964_01058 | Not Available | - | 1066931 - 1067899 | 36246.4 |
| gdpmannose 4,6-dehydratase | SAMN05660964_01059 | Not Available | - | 1067905 - 1069053 | 43219.7 |
| putative colanic acid biosynthesis glycosyltransferase | SAMN05660964_01060 | Not Available | - | 1069067 - 1069876 | 30366.5 |
| beta-1,4-n-acetylglucosaminyltransferase | SAMN05660964_01061 | Not Available | - | 1069869 - 1070363 | 19078.9 |
| oligosaccharide biosynthesis protein alg14 like | SAMN05660964_01062 | Not Available | - | 1070335 - 1070820 | 18506.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.