Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix caldifontis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix caldifontis strain DSM 21228
Accession NumberFNQP00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3767 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | SAMN05660964_00088 | Not Available | + | 85994 - 86896 | 34489.3 |
| rhamnosyltransferase | SAMN05660964_00089 | Not Available | + | 86913 - 88001 | 40631.1 |
| lsu ribosomal protein l13p | SAMN05660964_00090 | Not Available | + | 88306 - 88734 | 16106.5 |
| small subunit ribosomal protein s9 | SAMN05660964_00091 | Not Available | + | 88752 - 89144 | 14209.2 |
| outer membrane protein (porin) | SAMN05660964_00092 | Not Available | + | 89457 - 90479 | 34687.9 |
| antitoxin component of toxin-antitoxin stability system, dna-binding transcriptional repressor | SAMN05660964_00093 | Not Available | + | 90599 - 90838 | 9092.17 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN05660964_00094 | Not Available | + | 90841 - 91227 | 14947.2 |
| hypothetical protein | SAMN05660964_00095 | Not Available | + | 91227 - 91715 | 18345.1 |
| fad/fmn-containing dehydrogenase | SAMN05660964_00096 | Not Available | + | 91801 - 95655 | 143329.0 |
| putative transmembrane protein (pgpgw) | SAMN05660964_00097 | Not Available | - | 95657 - 95983 | 12316.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.