Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas sp. OK242
Accession NumberFNOR00000000.1
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ketosteroid isomerase-related protein | SAMN04515617_10175 | Not Available | + | 92936 - 93400 | 17296.7 |
| transcriptional regulator, iclr family | SAMN04515617_10176 | Not Available | - | 93517 - 94299 | 28667.9 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04515617_10177 | Not Available | + | 94431 - 95330 | 32911.3 |
| shikimate dehydrogenase | SAMN04515617_10178 | Not Available | + | 95323 - 96171 | 30196.8 |
| sugar phosphate isomerase/epimerase | SAMN04515617_10179 | Not Available | + | 96168 - 97055 | 32374.8 |
| 3-dehydroquinate dehydratase | SAMN04515617_10180 | Not Available | + | 97138 - 97611 | 16608.8 |
| outer membrane protein (porin) | SAMN04515617_10181 | Not Available | + | 97682 - 98803 | 40127.1 |
| na+/melibiose symporter | SAMN04515617_10182 | Not Available | + | 98894 - 100258 | 48451.7 |
| mfs transporter, mhs family, shikimate and dehydroshikimate transport protein | SAMN04515617_10183 | Not Available | + | 100289 - 101647 | 48523.2 |
| hypothetical protein | SAMN04515617_10184 | Not Available | + | 101726 - 101893 | 5839.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.