Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arginase | SAMN04515617_1389 | Not Available | + | 4913897 - 4914808 | 32659.2 |
| polar amino acid transport system substrate-binding protein | SAMN04515617_13810 | Not Available | + | 4914972 - 4915751 | 28256.2 |
| polar amino acid transport system permease protein | SAMN04515617_13811 | Not Available | + | 4915790 - 4916542 | 27896.3 |
| polar amino acid transport system atp-binding protein | SAMN04515617_13812 | Not Available | + | 4916539 - 4917264 | 26402.6 |
| lyase | SAMN04515617_13813 | Not Available | + | 4917419 - 4917754 | 12441.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04515617_1391 | Not Available | + | 4917903 - 4918511 | 23560.9 |
| hypothetical protein | SAMN04515617_1392 | Not Available | + | 4918831 - 4919010 | 6205.6 |
| histone deacetylase domain-containing protein | SAMN04515617_1393 | Not Available | - | 4919205 - 4919840 | 22589.7 |
| hypothetical protein | SAMN04515617_1394 | Not Available | - | 4919884 - 4920078 | 6867.93 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN04515617_1395 | Not Available | - | 4920150 - 4923035 | 106785.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.