Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. OK242 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Collimonas sp. OK242
Accession NumberFNOR00000000.1
Gene Summary
Adenine Count
1072391 bp
Thymine Count
1065792 bp
Guanine Count
1409540 bp
Cytosine Count
1429377 bp
Genome Length
4978279 bp
Protein-coding Genes
4609 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04515617_101253 | Not Available | - | 277376 - 278329 | 35254.2 |
| nucleoside-diphosphate-sugar epimerase | SAMN04515617_101254 | Not Available | - | 278435 - 279490 | 39905.9 |
| methionyl-trna formyltransferase | SAMN04515617_101255 | Not Available | - | 279588 - 280496 | 32742.7 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | SAMN04515617_101256 | Not Available | - | 280493 - 281449 | 35647.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04515617_101257 | Not Available | - | 281460 - 282602 | 41490.7 |
| eama-like transporter family protein | SAMN04515617_101258 | Not Available | - | 282688 - 283059 | 12951.4 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04515617_101259 | Not Available | - | 283072 - 284829 | 64978.3 |
| uncharacterized conserved protein, contains mth938-like domain | SAMN04515617_101260 | Not Available | - | 284822 - 285220 | 14693.5 |
| alanine-synthesizing transaminase | SAMN04515617_101261 | Not Available | + | 285603 - 286832 | 45565.8 |
| homoserine dehydrogenase | SAMN04515617_101262 | Not Available | + | 286917 - 288227 | 46412.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.