Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase 2 | SAMN04488090_0008 | Not Available | + | 7099 - 9894 | 103923.0 |
| arac-type dna-binding protein | SAMN04488090_0009 | Not Available | - | 9898 - 10776 | 34026.0 |
| protein of unknown function | SAMN04488090_0010 | Not Available | + | 11086 - 11718 | 23641.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0011 | Not Available | + | 11760 - 14999 | 118069.0 |
| starch-binding associating with outer membrane | SAMN04488090_0012 | Not Available | + | 15016 - 16794 | 65148.5 |
| hypothetical protein | SAMN04488090_0013 | Not Available | - | 16864 - 18267 | 53312.9 |
| alpha-l-fucosidase | SAMN04488090_0014 | Not Available | + | 18475 - 19722 | 46196.8 |
| transcriptional regulator, hxlr family | SAMN04488090_0015 | Not Available | - | 19751 - 20065 | 11590.2 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN04488090_0016 | Not Available | + | 20320 - 21237 | 34421.1 |
| adenylosuccinate synthetase | SAMN04488090_0017 | Not Available | - | 21333 - 22607 | 46397.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
