Ferrimonas sediminum strain DSM 23317

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas sediminum strain DSM 23317 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism and thrives optimally at a temperature of 25.0°C. This organism's Gram-negative classification is indicative of its distinctive cell wall structure, which comprises an outer membrane containing lipopolysaccharides, a characteristic feature of many environmental and clinical bacteria. As a facultative aerobe, Ferrimonas sediminum has the metabolic versatility to utilize oxygen when available, while also possessing the ability to survive in anaerobic conditions. This adaptability to varying oxygen levels suggests that the strain may play a role in diverse environments, potentially contributing to biogeochemical cycles, particularly in sedimentary habitats where oxygen gradients are common. The optimal growth temperature of 25.0°C aligns with temperate environmental contexts, which may influence its ecological interactions and metabolic processes. The ability of this bacterium to thrive in such conditions highlights its potential significance in microbial communities, particularly in sediment-rich ecosystems where it may engage in nutrient cycling or interact with other microbial species. Overall, Ferrimonas sediminum strain DSM 23317 exemplifies the ecological versatility of microbial life, showcasing the importance of environmental factors in shaping microbial physiology and community dynamics. Its presence in sedimentary environments could provide insights into the roles of bacteria in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas sediminum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferrimonas sediminum strain DSM 23317

Accession NumberFNEM00000000.1

Gene Summary

Adenine Count

936234 bp

Thymine Count

928564 bp

Guanine Count

1248066 bp

Cytosine Count

1257980 bp

Genome Length

4375383 bp

Protein-coding Genes

3941 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s rrna m(7)g-527 methyltransferaseSAMN04488540_12220Not Available-3979671 - 398029422962.9
trna uridine 5-carboxymethylaminomethyl modification enzymeSAMN04488540_12221Not Available-3980379 - 398226869486.1
mioc proteinSAMN04488540_12222Not Available-3982690 - 398312715609.5
trna modification gtpase trmeSAMN04488540_12223Not Available-3983243 - 398461049584.0
protein translocase subunit yidcSAMN04488540_12224Not Available-3984715 - 398633160638.5
chromosomal replication initiator protein dnaaSAMN04488540_12225Not Available+3987487 - 398886651898.0
dna polymerase iii, beta subunitSAMN04488540_12226Not Available+3988883 - 398998341336.7
dna replication and repair protein recfSAMN04488540_12227Not Available+3989983 - 399105040507.8
dna gyrase subunit bSAMN04488540_12228Not Available+3991065 - 399347989497.0
gmp reductaseSAMN04488540_12229Not Available-3993779 - 399481637514.9

Displaying genes 3641 – 3650 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites