Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Ferrimonadaceae
Genus
Ferrimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Ferrimonadaceae |
| Genus | Ferrimonas |
| Species | Ferrimonas sediminum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Ferrimonas sediminum strain DSM 23317
Accession NumberFNEM00000000.1
Gene Summary
Adenine Count
936234 bp
Thymine Count
928564 bp
Guanine Count
1248066 bp
Cytosine Count
1257980 bp
Genome Length
4375383 bp
Protein-coding Genes
3941 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04488540_11592 | Not Available | + | 3432936 - 3434330 | 50868.5 |
| glycosyl transferase family 2 | SAMN04488540_11593 | Not Available | + | 3434327 - 3435187 | 32155.0 |
| n-acetylneuraminate synthase | SAMN04488540_11594 | Not Available | + | 3435196 - 3436257 | 38795.3 |
| spore coat polysaccharide biosynthesis protein spsf | SAMN04488540_11595 | Not Available | + | 3436311 - 3437120 | 29992.3 |
| sialic acid synthase spse, contains c-terminal saf domain | SAMN04488540_11596 | Not Available | + | 3437117 - 3438088 | 35836.4 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04488540_11597 | Not Available | + | 3438069 - 3438737 | 22861.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488540_11598 | Not Available | + | 3438744 - 3439919 | 42983.0 |
| hypothetical protein | SAMN04488540_11599 | Not Available | - | 3439983 - 3441062 | 40186.9 |
| cdp-glycerol glycerophosphotransferase, tagb/spsb family | SAMN04488540_115100 | Not Available | - | 3441087 - 3442124 | 39064.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488540_115101 | Not Available | - | 3442199 - 3442978 | 29916.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
