Ferrimonas sediminum strain DSM 23317

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas sediminum strain DSM 23317 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism and thrives optimally at a temperature of 25.0°C. This organism's Gram-negative classification is indicative of its distinctive cell wall structure, which comprises an outer membrane containing lipopolysaccharides, a characteristic feature of many environmental and clinical bacteria. As a facultative aerobe, Ferrimonas sediminum has the metabolic versatility to utilize oxygen when available, while also possessing the ability to survive in anaerobic conditions. This adaptability to varying oxygen levels suggests that the strain may play a role in diverse environments, potentially contributing to biogeochemical cycles, particularly in sedimentary habitats where oxygen gradients are common. The optimal growth temperature of 25.0°C aligns with temperate environmental contexts, which may influence its ecological interactions and metabolic processes. The ability of this bacterium to thrive in such conditions highlights its potential significance in microbial communities, particularly in sediment-rich ecosystems where it may engage in nutrient cycling or interact with other microbial species. Overall, Ferrimonas sediminum strain DSM 23317 exemplifies the ecological versatility of microbial life, showcasing the importance of environmental factors in shaping microbial physiology and community dynamics. Its presence in sedimentary environments could provide insights into the roles of bacteria in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas sediminum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferrimonas sediminum strain DSM 23317

Accession NumberFNEM00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3941 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
protein of unknown functionSAMN04488540_101187Not Available+203217 - 20353412049.4
ser/thr protein kinase rdoa involved in cpx stress response, mazf antagonistSAMN04488540_101188Not Available+203531 - 20452637986.0
thiol:disulfide interchange protein dsbaSAMN04488540_101189Not Available+204581 - 20519222567.5
protein of unknown functionSAMN04488540_101190Not Available+205568 - 2057747740.75
cell division protein zapbSAMN04488540_101191Not Available-205805 - 2060689953.63
cytochrome c3SAMN04488540_101192Not Available-206363 - 20675814557.1
flavocytochrome cSAMN04488540_101193Not Available-206790 - 20835255666.9
histidine ammonia-lyaseSAMN04488540_101194Not Available-208667 - 21031359370.5
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN04488540_101195Not Available+210892 - 21242757115.1
hypothetical proteinSAMN04488540_101196Not Available-212546 - 21368242307.9

Displaying genes 191 – 200 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites