Ferrimonas sediminum strain DSM 23317

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Ferrimonadaceae

Genus

Ferrimonas

Description

Ferrimonas sediminum strain DSM 23317 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism and thrives optimally at a temperature of 25.0°C. This organism's Gram-negative classification is indicative of its distinctive cell wall structure, which comprises an outer membrane containing lipopolysaccharides, a characteristic feature of many environmental and clinical bacteria. As a facultative aerobe, Ferrimonas sediminum has the metabolic versatility to utilize oxygen when available, while also possessing the ability to survive in anaerobic conditions. This adaptability to varying oxygen levels suggests that the strain may play a role in diverse environments, potentially contributing to biogeochemical cycles, particularly in sedimentary habitats where oxygen gradients are common. The optimal growth temperature of 25.0°C aligns with temperate environmental contexts, which may influence its ecological interactions and metabolic processes. The ability of this bacterium to thrive in such conditions highlights its potential significance in microbial communities, particularly in sediment-rich ecosystems where it may engage in nutrient cycling or interact with other microbial species. Overall, Ferrimonas sediminum strain DSM 23317 exemplifies the ecological versatility of microbial life, showcasing the importance of environmental factors in shaping microbial physiology and community dynamics. Its presence in sedimentary environments could provide insights into the roles of bacteria in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyFerrimonadaceae
GenusFerrimonas
SpeciesFerrimonas sediminum
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ferrimonas sediminum strain DSM 23317

Accession NumberFNEM00000000.1

Gene Summary

Adenine Count

936234 bp

Thymine Count

928564 bp

Guanine Count

1248066 bp

Cytosine Count

1257980 bp

Genome Length

4375383 bp

Protein-coding Genes

3941 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
lps-assembly lipoproteinSAMN04488540_104332Not Available+1682792 - 168328018421.2
dna polymerase iii, delta subunitSAMN04488540_104333Not Available+1683281 - 168429738027.0
nicotinate-nucleotide adenylyltransferaseSAMN04488540_104334Not Available+1684294 - 168495924712.8
ribosome-associated proteinSAMN04488540_104335Not Available+1684996 - 168533112439.9
23s rrna (pseudouridine-1915-n(3)-) methyltransferaseSAMN04488540_104336Not Available+1685335 - 168580217400.2
penicillin-binding protein 2SAMN04488540_104337Not Available+1685802 - 168767970050.4
cell elongation-specific peptidoglycan biosynthesis regulator rodaSAMN04488540_104338Not Available+1687672 - 168877840337.3
membrane-bound lytic murein transglycosylase bSAMN04488540_104339Not Available+1688793 - 168974635277.5
rare lipoprotein aSAMN04488540_104340Not Available+1689730 - 169052129318.1
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)SAMN04488540_104341Not Available+1690518 - 169178646618.6

Displaying genes 1561 – 1570 of 4013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites