Pseudomonas alcaliphila strain JCM 10630

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Ectopseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusEctopseudomonas
SpeciesEctopseudomonas alcaliphila
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas alcaliphila strain JCM 10630

Accession NumberFNAE00000000.1

Gene Summary

Adenine Count

999400 bp

Thymine Count

961382 bp

Guanine Count

1634924 bp

Cytosine Count

1686935 bp

Genome Length

5283714 bp

Protein-coding Genes

4786 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
multisubunit potassium/proton antiporter, phaa subunit /multisubunit potassium/proton antiporter, phab subunitSAMN05216575_101602Not Available-617162 - 619954100345.0
outer membrane lipoprotein slybSAMN05216575_101603Not Available-620325 - 62078615584.9
glycerate kinaseSAMN05216575_101604Not Available-620898 - 62203438455.0
predicted d-glycerate permeaseSAMN05216575_101605Not Available-622089 - 62345647169.2
transcriptional regulator, cdar familySAMN05216575_101606Not Available-623655 - 62477341975.0
prop effectorSAMN05216575_101607Not Available-624987 - 62549618718.4
beta-lactamaseSAMN05216575_101608Not Available-625706 - 62662633049.0
pyridoxamine 5'-phosphate oxidaseSAMN05216575_101609Not Available-626774 - 62742125041.7
outer membrane protein ompaSAMN05216575_101610Not Available-627503 - 62815623632.5
cubico group peptidase, beta-lactamase class c familySAMN05216575_101611Not Available-628239 - 62938441159.0

Displaying genes 741 – 750 of 4943 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

331 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 331 metabolites