Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Ectopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Ectopseudomonas |
| Species | Ectopseudomonas alcaliphila |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas alcaliphila strain JCM 10630
Accession NumberFNAE00000000.1
Gene Summary
Adenine Count
999400 bp
Thymine Count
961382 bp
Guanine Count
1634924 bp
Cytosine Count
1686935 bp
Genome Length
5283714 bp
Protein-coding Genes
4786 genes
Non-Coding Genes
157 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05216575_1011057 | Not Available | - | 1084268 - 1085242 | 36033.6 |
| beta-barrel assembly machine subunit bamd | SAMN05216575_1011058 | Not Available | + | 1085381 - 1086373 | 37503.1 |
| uncharacterized protein | SAMN05216575_1011059 | Not Available | + | 1086565 - 1086807 | 9224.17 |
| sensor protein pils | SAMN05216575_1011060 | Not Available | + | 1086797 - 1088389 | 59109.9 |
| two-component response regulator pilr | SAMN05216575_1011061 | Not Available | + | 1088392 - 1089732 | 49837.1 |
| glycine oxidase | SAMN05216575_1011062 | Not Available | - | 1089857 - 1090963 | 38940.2 |
| type iv fimbrial biogenesis protein fimt | SAMN05216575_1011063 | Not Available | + | 1091053 - 1091562 | 19191.3 |
| type iv fimbrial biogenesis protein fimu | SAMN05216575_1011064 | Not Available | + | 1091704 - 1092192 | 17640.0 |
| type iv pilus assembly protein pilv | SAMN05216575_1011065 | Not Available | + | 1092201 - 1092761 | 20532.5 |
| type iv pilus assembly protein pilw | SAMN05216575_1011066 | Not Available | + | 1092758 - 1093606 | 30831.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
