Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria marina |
| Strain | strain CGMCC 1.9108 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
927639 bp
Thymine Count
931575 bp
Guanine Count
1568044 bp
Cytosine Count
1567964 bp
Genome Length
4995422 bp
Protein-coding Genes
4719 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Rna polymerase sigma factor | SAMN04488239_11043 | Not Available | + | 2924168 - 2926153 | 75610.4 |
| predicted zn-dependent protease, minimal metalloprotease (mmp)-like domain | SAMN04488239_11044 | Not Available | - | 2926210 - 2926596 | 14597.2 |
| hypothetical protein | SAMN04488239_11045 | Not Available | + | 2926862 - 2927206 | 12591.0 |
| Terminase large subunit | SAMN04488239_11046 | Not Available | + | 2927259 - 2928485 | 44505.2 |
| Portal protein | SAMN04488239_11047 | Not Available | + | 2928610 - 2929782 | 41830.9 |
| hypothetical protein | SAMN04488239_11048 | Not Available | + | 2929775 - 2929999 | 8346.09 |
| Putative prohead protease | SAMN04488239_11049 | Not Available | + | 2930028 - 2930585 | 20322.2 |
| Phage major capsid protein | SAMN04488239_11050 | Not Available | + | 2930619 - 2931797 | 41827.4 |
| Dna packaging/head-tail-connector | SAMN04488239_11051 | Not Available | + | 2931964 - 2932563 | 21206.6 |
| Putative head-tail adaptor | SAMN04488239_11052 | Not Available | + | 2932560 - 2932898 | 12127.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
