Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose 1-dehydrogenase | SAMN05444679_1018 | Not Available | + | 4979 - 5743 | 26585.7 |
| enoyl-coa hydratase/carnithine racemase | SAMN05444679_1019 | Not Available | + | 5753 - 6559 | 28776.0 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_10110 | Not Available | + | 6582 - 7577 | 34904.4 |
| uncharacterized domain 1-containing protein | SAMN05444679_10111 | Not Available | + | 7574 - 7975 | 13938.7 |
| crotonobetainyl-coa:carnitine coa-transferase caib | SAMN05444679_10112 | Not Available | + | 7996 - 9198 | 42441.8 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05444679_10113 | Not Available | - | 9195 - 10094 | 33371.5 |
| predicted dithiol-disulfide oxidoreductase, duf899 family | SAMN05444679_10114 | Not Available | + | 10326 - 11111 | 29862.8 |
| hypothetical protein | SAMN05444679_10115 | Not Available | - | 11135 - 11617 | 17182.9 |
| hypothetical protein | SAMN05444679_10116 | Not Available | - | 11669 - 11878 | 7537.69 |
| protein of unknown function | SAMN05444679_10117 | Not Available | - | 12256 - 13170 | 33098.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.