Epibacterium ulvae strain U95

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Epibacterium

Description

Epibacterium ulvae strain U95 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and optimal growth at a temperature of 25.0 °C. This microbe is notable for its adaptation to aerobic environments, which suggests a reliance on oxygen for its metabolic processes. The Gram-negative classification indicates that E. ulvae possesses a thin peptidoglycan layer surrounded by an outer membrane, a feature that may influence its interactions with surrounding environments and other microorganisms. The rod shape of this bacterium may facilitate motility and colonization in its ecological niche, enhancing its ability to thrive in competitive environments. The optimal growth temperature of 25.0 °C aligns with conditions that may be found in various aquatic habitats, indicating a potential ecological role in these ecosystems. Understanding the characteristics of E. ulvae strain U95 can provide insights into its ecological interactions and potential roles in nutrient cycling within its habitat. Its aerobic nature suggests it may contribute to the degradation of organic materials in oxygen-rich environments, thereby playing a significant role in the ecological dynamics of its surroundings. This functional capacity may position E. ulvae as an important player in maintaining the health and stability of its ecosystem, particularly in contexts where aerobic processes are critical for nutrient availability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusEpibacterium
SpeciesEpibacterium ulvae
Strainstrain U95

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Epibacterium ulvae strain U95


Gene Summary

Adenine Count

935133 bp

Thymine Count

950131 bp

Guanine Count

1071311 bp

Cytosine Count

1037494 bp

Genome Length

3994069 bp

Protein-coding Genes

3836 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
putative spermidine/putrescine transport system permease proteinSAMN04488118_1017Not Available+4701 - 549228528.7
hypothetical proteinSAMN04488118_1018Not Available+5519 - 661639401.9
invasion protein ialb, involved in pathogenesisSAMN04488118_1019Not Available-6817 - 742823192.2
Trna-trpNot AvailableNot Available+7643 - 7718Not Available
hypothetical proteinSAMN04488118_10111Not Available+7812 - 853427118.2
hypothetical proteinSAMN04488118_10112Not Available+8694 - 962033566.3
methyl-accepting chemotaxis proteinSAMN04488118_10113Not Available+9654 - 1158569684.7
threonine/homoserine/homoserine lactone efflux proteinSAMN04488118_10114Not Available-11624 - 1222021802.3
transcriptional regulator, asnc familySAMN04488118_10115Not Available+12293 - 1274516685.0
beta-methylmalyl-coa/l-malyl-coa lyaseSAMN04488118_10116Not Available-12817 - 1377634066.6

Displaying genes 31 – 40 of 3901 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites