Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2, pa0141 family | SAMN03080610_00031 | Not Available | - | 24231 - 25100 | 33581.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN03080610_00032 | Not Available | + | 25180 - 26517 | 48662.7 |
| gcra cell cycle regulator | SAMN03080610_00033 | Not Available | - | 26612 - 27124 | 18986.6 |
| acetylornithine/n-succinyldiaminopimelate aminotransferase | SAMN03080610_00034 | Not Available | + | 27484 - 28686 | 42689.6 |
| ornithine carbamoyltransferase | SAMN03080610_00035 | Not Available | + | 28699 - 29619 | 33964.5 |
| molecular chaperone hsp33 | SAMN03080610_00036 | Not Available | + | 29616 - 30614 | 36529.1 |
| rnd family efflux transporter, mfp subunit | SAMN03080610_00037 | Not Available | + | 30790 - 32169 | 50262.3 |
| acrb/acrd/acrf family protein | SAMN03080610_00038 | Not Available | + | 32166 - 35561 | 122050.0 |
| apag protein | SAMN03080610_00039 | Not Available | - | 35578 - 35970 | 14446.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN03080610_00040 | Not Available | + | 36387 - 38354 | 71812.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.