Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa domain-containing protein | SAMN03080610_00011 | Not Available | + | 8942 - 9496 | 20126.3 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN03080610_00012 | Not Available | - | 9475 - 10383 | 33208.5 |
| diacylglycerol kinase family enzyme | SAMN03080610_00013 | Not Available | - | 10380 - 11345 | 35180.1 |
| predicted arabinose efflux permease, mfs family | SAMN03080610_00014 | Not Available | - | 11419 - 12582 | 39481.5 |
| nad(p)h-dependent fmn reductase | SAMN03080610_00015 | Not Available | - | 12850 - 13404 | 20263.4 |
| transcriptional regulator, hxlr family | SAMN03080610_00016 | Not Available | + | 13478 - 13867 | 14428.5 |
| uncharacterized membrane protein ycap, duf421 family | SAMN03080610_00017 | Not Available | - | 13859 - 14416 | 19722.0 |
| hypothetical protein | SAMN03080610_00018 | Not Available | - | 14420 - 14737 | 11020.2 |
| cold shock protein (beta-ribbon, cspa family) | SAMN03080610_00019 | Not Available | + | 15049 - 15258 | 7500.8 |
| hypothetical protein | SAMN03080610_00020 | Not Available | + | 15320 - 15511 | 6944.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.