Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN03080610_00002 | Not Available | - | 372 - 1181 | 29820.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN03080610_00003 | Not Available | - | 1276 - 2118 | 31804.7 |
| hypothetical protein | SAMN03080610_00004 | Not Available | - | 2111 - 2509 | 15126.6 |
| cupin domain protein | SAMN03080610_00005 | Not Available | - | 2623 - 3018 | 14616.4 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 4087 - 5434 | 18.01 |
| c4-dicarboxylate transporter, dctm subunit | SAMN03080610_00006 | Not Available | - | 3106 - 4521 | 49838.2 |
| c4-dicarboxylate transporter, dctq subunit | SAMN03080610_00007 | Not Available | - | 4525 - 5220 | 26310.9 |
| c4-dicarboxylate-binding protein dctp | SAMN03080610_00008 | Not Available | - | 5374 - 6372 | 36175.5 |
| hypothetical protein | SAMN03080610_00009 | Not Available | - | 6601 - 7506 | 31166.6 |
| dna-binding transcriptional regulator, gntr family | SAMN03080610_00010 | Not Available | - | 7775 - 8476 | 25809.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.