Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Head closure protein | SAMN03080610_00654 | Not Available | + | 695974 - 696318 | 12548.1 |
| Tail protein | SAMN03080610_00655 | Not Available | + | 696318 - 696731 | 14482.4 |
| hypothetical protein | SAMN03080610_00656 | Not Available | + | 696868 - 697233 | 13417.3 |
| hypothetical protein | SAMN03080610_00657 | Not Available | + | 697226 - 697828 | 22146.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN03080610_00658 | Not Available | - | 697983 - 698996 | 35636.0 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | SAMN03080610_00659 | Not Available | + | 699171 - 699578 | 14573.2 |
| phage tail tube protein, gta-gp10 | SAMN03080610_00660 | Not Available | + | 699591 - 699956 | 12359.7 |
| Putative tail tape measure protein | SAMN03080610_00661 | Not Available | + | 700187 - 700774 | 19618.3 |
| Tail protein | SAMN03080610_00662 | Not Available | + | 700781 - 701422 | 23110.2 |
| Minor tail protein | SAMN03080610_00663 | Not Available | + | 701419 - 702318 | 32069.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.