Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00021 | Not Available | + | 15635 - 15787 | 5372.56 |
| hypothetical protein | SAMN03080610_00022 | Not Available | + | 15791 - 16030 | 8783.81 |
| hypothetical protein | SAMN03080610_00023 | Not Available | + | 16091 - 16360 | 9608.03 |
| hypothetical protein | SAMN03080610_00024 | Not Available | + | 16366 - 16767 | 14060.6 |
| coproporphyrinogen iii oxidase, anaerobic | SAMN03080610_00025 | Not Available | - | 17090 - 18436 | 49766.0 |
| (s)-sulfolactate dehydrogenase | SAMN03080610_00026 | Not Available | + | 18621 - 19703 | 37801.6 |
| (2r)-3-sulfolactate dehydrogenase (nadp+) | SAMN03080610_00027 | Not Available | + | 19700 - 20701 | 33878.7 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN03080610_00028 | Not Available | + | 20720 - 22177 | 51882.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase | SAMN03080610_00029 | Not Available | - | 22317 - 22856 | 19570.6 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN03080610_00030 | Not Available | + | 23010 - 24194 | 42747.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.