Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Gta-like protein | SAMN03080610_00664 | Not Available | + | 702330 - 702803 | 17227.5 |
| Tail protein | SAMN03080610_00665 | Not Available | + | 702803 - 706693 | 139299.0 |
| Chitinase-like protein | SAMN03080610_00666 | Not Available | + | 706747 - 707568 | 29163.4 |
| hypothetical protein | SAMN03080610_00667 | Not Available | + | 707565 - 707765 | 7105.68 |
| Putative membrane protein | SAMN03080610_00668 | Not Available | + | 708105 - 708599 | 17661.2 |
| hypothetical protein | SAMN03080610_00669 | Not Available | + | 708710 - 708985 | 9421.71 |
| Hybrid sensor histidine kinase - response regulator | SAMN03080610_00670 | Not Available | + | 709113 - 709799 | 25428.1 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 233 - 348 | 18.01 |
| transposase domain | SAMN03080610_00001 | Not Available | - | 1 - 269 | 10288.6 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 465 - 3215 | 18.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.