Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ykwd, contains cap (csp/antigen 5/pr1) domain | SAMN03080610_00092 | Not Available | + | 99176 - 99664 | 17225.8 |
| protein of unknown function | SAMN03080610_00093 | Not Available | - | 99770 - 100186 | 15027.7 |
| protein of unknown function | SAMN03080610_00094 | Not Available | - | 100179 - 100409 | 8571.49 |
| hypothetical protein | SAMN03080610_00095 | Not Available | + | 100862 - 101434 | 19554.3 |
| simple sugar transport system atp-binding protein | SAMN03080610_00096 | Not Available | + | 101421 - 103067 | 59091.1 |
| nucleoside abc transporter membrane protein | SAMN03080610_00097 | Not Available | + | 103064 - 104203 | 40235.0 |
| simple sugar transport system permease protein | SAMN03080610_00098 | Not Available | + | 104238 - 105206 | 33948.2 |
| cytidine deaminase | SAMN03080610_00099 | Not Available | + | 105208 - 105597 | 13657.4 |
| purine-nucleoside phosphorylase | SAMN03080610_00100 | Not Available | + | 105594 - 106403 | 28424.6 |
| thymidine phosphorylase | SAMN03080610_00101 | Not Available | + | 106400 - 107716 | 45555.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.