Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN03080610_00062 | Not Available | + | 63440 - 64366 | 33045.2 |
| conserved hypothetical protein | SAMN03080610_00063 | Not Available | + | 64363 - 65124 | 27850.6 |
| cytochrome c553 | SAMN03080610_00064 | Not Available | - | 65270 - 66730 | 53232.7 |
| putative phosphoesterase | SAMN03080610_00065 | Not Available | - | 66799 - 67518 | 25840.2 |
| atp-dependent helicase lhr and lhr-like helicase | SAMN03080610_00066 | Not Available | - | 67475 - 70096 | 96434.2 |
| hypothetical protein | SAMN03080610_00067 | Not Available | + | 70114 - 70683 | 20909.0 |
| putative mrna 3-end processing factor | SAMN03080610_00068 | Not Available | + | 70758 - 71768 | 36628.8 |
| acetyltransferase (gnat) family protein | SAMN03080610_00069 | Not Available | - | 71772 - 72335 | 21082.2 |
| hypothetical protein | SAMN03080610_00070 | Not Available | - | 72358 - 72558 | 7693.37 |
| dna ligase-1 | SAMN03080610_00071 | Not Available | + | 72862 - 74490 | 60836.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.