Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dctp deaminase | SAMN03080610_00052 | Not Available | + | 49291 - 50382 | 39473.0 |
| hypothetical protein | SAMN03080610_00053 | Not Available | - | 50411 - 51145 | 26355.4 |
| phage repressor protein c, contains cro/c1-type hth and peptisase s24 domains | SAMN03080610_00054 | Not Available | - | 51161 - 51823 | 23653.1 |
| acyl-coa thioesterase fadm | SAMN03080610_00055 | Not Available | - | 51964 - 52515 | 20844.3 |
| 3-hydroxyacyl-coa dehydrogenase / enoyl-coa hydratase / 3-hydroxybutyryl-coa epimerase | SAMN03080610_00056 | Not Available | - | 52533 - 54737 | 79039.2 |
| uncharacterized conserved protein, cupin superfamily | SAMN03080610_00057 | Not Available | - | 54757 - 55224 | 16612.3 |
| acetyl-coa c-acetyltransferase | SAMN03080610_00058 | Not Available | - | 55228 - 56436 | 42128.4 |
| hypothetical protein | SAMN03080610_00059 | Not Available | - | 56515 - 58323 | 64278.8 |
| dna-binding transcriptional regulator, merr family | SAMN03080610_00060 | Not Available | - | 58463 - 58864 | 15446.8 |
| localization factor podjl | SAMN03080610_00061 | Not Available | + | 59214 - 63350 | 146978.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.