Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Afifellaceae
Genus
Afifella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Afifellaceae |
| Genus | Afifella |
| Species | Afifella marina |
| Strain | DSM 2698 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721670 bp
Thymine Count
734935 bp
Guanine Count
1271881 bp
Cytosine Count
1234935 bp
Genome Length
3963421 bp
Protein-coding Genes
3640 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trehalose synthase | SAMN03080610_00041 | Not Available | + | 38572 - 40050 | 54797.5 |
| catalase | SAMN03080610_00042 | Not Available | + | 40336 - 42453 | 78440.5 |
| aldo/keto reductase family protein | SAMN03080610_00043 | Not Available | - | 42549 - 42944 | 13730.5 |
| Trna-gly | Not Available | Not Available | + | 43038 - 43112 | Not Available |
| lysyl-trna synthetase, class i | SAMN03080610_00045 | Not Available | - | 43214 - 44824 | 59884.1 |
| tellurite resistance protein terb | SAMN03080610_00046 | Not Available | + | 45002 - 45415 | 15000.1 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN03080610_00047 | Not Available | + | 45454 - 46260 | 30239.4 |
| polar amino acid transport system substrate-binding protein | SAMN03080610_00048 | Not Available | - | 46270 - 47130 | 32021.1 |
| phosphatidylglycerophosphate synthase | SAMN03080610_00049 | Not Available | + | 47196 - 47798 | 21038.0 |
| o-succinylhomoserine sulfhydrylase | SAMN03080610_00050 | Not Available | - | 47811 - 48998 | 42132.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.