Thiohalorhabdus denitrificans strain HL 19

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiohalorhabdales

Family

Thiohalorhabdaceae

Genus

Thiohalorhabdus

Description

Thiohalorhabdus denitrificans strain HL 19 is a Gram-negative, rod-shaped microbe characterized as a non-spore-forming organism that thrives optimally at a temperature of 32.0°C. This strain is classified as a microaerophile, indicating that it requires reduced oxygen levels for its metabolic processes, which is typical for organisms involved in denitrification. The specific physiological adaptations of Thiohalorhabdus denitrificans strain HL 19 allow it to occupy niches where oxygen is limited, likely contributing to its role in the nitrogen cycle through denitrification. Given its microaerophilic nature, this organism may be particularly well-suited for environments such as sediment layers or water columns where oxygen concentrations fluctuate. The absence of sporulation suggests a reliance on specific environmental conditions for survival and proliferation, rather than forming resistant spores. This microbe's ability to engage in denitrification under microaerophilic conditions presents an important ecological function, potentially influencing nitrogen availability in its habitat. Such traits not only highlight the organism's metabolic versatility but also underscore its potential role in biogeochemical cycles, particularly in nutrient-rich or polluted environments where denitrification is essential for mitigating excess nitrogen.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiohalorhabdales
FamilyThiohalorhabdaceae
GenusThiohalorhabdus
SpeciesThiohalorhabdus denitrificans
Strainstrain HL 19

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiohalorhabdus denitrificans strain HL 19


Gene Summary

Adenine Count

441900 bp

Thymine Count

454059 bp

Guanine Count

1011202 bp

Cytosine Count

969482 bp

Genome Length

2876643 bp

Protein-coding Genes

2694 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
zinc-finger of transposase is204/is1001/is1096/is1165SAMN05661077_0169Not Available-1 - 2449402.18
5s ribosomal rna . bacterial tsuNot AvailableNot Available+1458 - 157318.01
nadh dehydrogenaseSAMN05661077_0170Not Available-431 - 165143108.6
na+/h+-dicarboxylate symporterSAMN05661077_0171Not Available-2077 - 331842026.4
l,d-transpeptidase catalytic domainSAMN05661077_0172Not Available+3450 - 452340579.8
hypothetical proteinSAMN05661077_0173Not Available-4601 - 48137695.15
nitrogen regulatory protein p-ii familySAMN05661077_0174Not Available-5041 - 536712029.6
hypothetical proteinSAMN05661077_0175Not Available-5360 - 8476116218.0
hypothetical proteinSAMN05661077_0176Not Available-8473 - 924326611.0
nadh-quinone oxidoreductase subunit lSAMN05661077_0177Not Available-9245 - 1095462141.0

Displaying genes 1 – 10 of 2743 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites