Klebsiella oxytoca strain 2880STDY5682666

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella oxytoca strain 2880STDY5682666 is a Gram-negative, nonsporulating rod-shaped bacterium that exhibits facultative anaerobic properties and thrives optimally at a temperature of 37.0°C. As a chemoheterotroph, this strain derives its energy from organic compounds, indicating its reliance on a diverse range of substrates for growth and metabolism. Klebsiella oxytoca is known to inhabit a variety of environments, which may include soil, water, and the gastrointestinal tracts of humans and animals. Its facultative anaerobic nature allows it to adapt to varying oxygen levels, enhancing its survival in different ecological niches. This adaptability may also contribute to its potential role in nutrient cycling within its habitats. Given its metabolic versatility and broad habitat range, K. oxytoca strain 2880STDY5682666 may play a significant role in the microbial communities of diverse environments, influencing organic matter decomposition and nutrient availability. Further exploration of its ecological interactions could provide insights into its contribution to ecosystem functions and microbial dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella oxytoca
Strainstrain 2880STDY5682666

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Klebsiella oxytoca strain 2880STDY5682666
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Klebsiella oxytoca strain 2880STDY5682666

FKYV00000000.1

Gene Summary

Adenine Count

1312440 bp

Thymine Count

1311827 bp

Guanine Count

1338606 bp

Cytosine Count

1338620 bp

Genome Length

5320060 bp

Protein-coding Genes

4571 genes

Non-Coding Genes

458 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Tail protein iSAMEA2273741_00362P26701-378961 - 37956622514.7
Baseplate assembly proteinSAMEA2273741_00363P51767-379559 - 38046732529.6
Phage baseplate assembly proteinSAMEA2273741_00364P51768-380454 - 38081313005.5
Baseplate assembly protein vSAMEA2273741_00365P31340-380810 - 38138820852.6
uncharacterised proteinSAMEA2273741_00366Not Available+381492 - 38229830714.6
Virion morphogenesis proteinSAMEA2273741_00367P36934-382240 - 38268617187.9
Putative phage tail proteinSAMEA2273741_00368P36933-382679 - 38311016144.1
Lysb familyglysis regulatory proteinSAMEA2273741_00369Not Available-383206 - 38363415803.8
Hypothetical proteinSAMEA2273741_00370Not Available-383631 - 38400814003.0
LysozymeSAMEA2273741_00371Q6XQ98-384010 - 38452218669.6

Displaying genes 11 – 20 of 5029 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

322 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 322 metabolites